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gcta

Here are 5 public repositories matching this topic...

Jianhua-Wang / easyfinemap

user-friendly pipeline for GWAS fine-mapping

python gwas conditional ld gcta fine-mapping paintor clumping caviarbf

Updated Mar 9, 2025
Python

OpenMendel / VarianceComponentModels.jl

Utilities for fitting and testing variance component models

julia variance-component openmendel gcta genetic-heritability

Updated Sep 9, 2022
Julia

cooljeanius / gcta

Fork/copy of a project some user wanted to see added to MacPorts. With included Eigen headers (well, some of them, at least).

c-plus-plus gcta

Updated Nov 5, 2026
C++

ht-diva / pqtl_conditional

Fine mapping analysis within the pQTL pipeline project

snakemake interval qtl gcta colocalization gwas-summary-statistics snakemake-pipeline cojo coloc

Updated Sep 23, 2026
R

MuhammadMuneeb007 / Benchmarking-Heritability-Estimation-Strategies-Across-85-Configurations-and-Their-Downstream-Effect

Benchmarking 86 heritability estimation configurations and downstream polygenic risk score performance across UK Biobank phenotypes. Associated paper: arXiv:2604.02394

benchmarking bioinformatics gwas genomics genetics reproducible-research computational-biology statistical-genetics gemma gcta quantitative-genetics complex-traits heritability ldsc ldpred2 polygenic-risk-score genetic-architecture ldak

Updated Oct 22, 2026
Python

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