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PardoEdgar/README.md

About me

Computational biologist and data scientist focused on understanding Animal and Ecosystem health at multiple scales, developing experimental, computational, and molecular tools. I have automated large-scale data extraction and analysis of snail cardiovascular physiology, plant anatomy, coral reef health status, and environmental sensor data. My interests focus on transforming complex biological data into new tools to assess animal and ecosystem biological condition for welfare and health.

  • B.Sc. Biologist, Research Assistant and Laboratory Instructor, Universidad del Rosario (2021-2025).
  • Research Fellow and Intern, Smithsonian Tropical Research Institute (STRI), Panama (2026-present).

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  1. snail-cardiac-activity snail-cardiac-activity Public

    Cardiac activity analysis in Cornu aspersum under experimentally induced behavioral states

    R 1

  2. py-Heart-ROI-Analyzer py-Heart-ROI-Analyzer Public

    Python tool for extracting pixel intensity and heart function data from cardiac videos using ROI selection via OpenCV.

    R 1

  3. Characterization-of-microbiota-during-different-physiological-states-in-Cornu-aspersum Characterization-of-microbiota-during-different-physiological-states-in-Cornu-aspersum Public

    16S microbiota analysis of Cornu aspersum across physiological states (active, aestivation, post-aestivation). Quality control with NanoStat, taxonomic assignment with Kraken2, and statistical anal…

    R

  4. CNN_Roolemsels CNN_Roolemsels Public

    Graphical user interface for Xylem vessels segmentation from root transversal sections in monocots using CNN U-net Artificial intelligence

    Python 1